The detailed information of tRNA gene sequence


Sequence ID>WENV170766050
Genome IDLWDU01040393
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 155
End posion on genome 56
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aacggttgtt
tRNA gene sequence 
GGAAGTGCTTGCACCTCTGGTGGGGGCCGCGGTCTTCAAAACCGTTGGGCCGTGTGTGAA
CCATACGGTCGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
tttcttttcg
Secondary structure (Cloverleaf model)
>WENV170766050	SeC(p)	TCA
                   t      GCCA tttcttttcg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    T     T A C C C     A
      C T C        T      + | | | |     G
    T       C A C G       G T G G G     C
    G       |   | |                 T T
    G       G G G C
      T G G        C     TGGGCCGTGTGTGAACCATACGGTCG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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