The detailed information of tRNA gene sequence


Sequence ID>WENV170766070
Genome IDLWDU01040521
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 17578
End posion on genome 17666
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaaagatct
tRNA gene sequence 
GGAGCTGTGGCTGAGTGGTCGAAAGCGCCGGCTTGCTAAGCCGGTGAACCGTTTATCGGT
TCCCTGGGTTCGAATCCCAGCGGCTCCGCtc
Downstream region at tRNA end position 
ttttcaaatc
Secondary structure (Cloverleaf model)
>WENV170766070	Ser	GCT
                   t      GCtc ttttcaaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T + G
                     G - C          T A
                    T     G A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       C T G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGAACCGTTTATCGGTTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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