The detailed information of tRNA gene sequence


Sequence ID>WENV170766080
Genome IDLWDU01040712
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 5379
End posion on genome 5453
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaggtcacca
tRNA gene sequence 
GGGCGACTAGCTCAGTTGGTTAGAGCGCCGTCCTCACACGGCGGAAGTCACAGGTTCGAG
TCCCGTGTCGCCCACtt
Downstream region at tRNA end position 
ttgtaagcac
Secondary structure (Cloverleaf model)
>WENV170766080	Val	CAC
                   a      ACtt ttgtaagcac
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G          T G
                    T     T G C C C     A
      T G A        A      | |   | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AAGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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