The detailed information of tRNA gene sequence


Sequence ID>WENV170766106
Genome IDLWDU01040754
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 33163
End posion on genome 33252
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position
aatcaaaggt
tRNA gene sequence
GGAAGGTTGCCAGAGCGGACGAATGGGGCGGCCTCGAAAGCCGTTGTGGCCTCCGGGTCA
CCGTGGGTTCGAATCCCACACCTTCCGCCA
Downstream region at tRNA end position
ccaatgattt
Secondary structure (Cloverleaf model)
>WENV170766106	Ser	CGA
                   t      GCCA ccaatgattt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G         | | |                 T T
    A       A T G G
      C G A        G     TGTGGCCTCCGGGTCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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