The detailed information of tRNA gene sequence


Sequence ID>WENV170766113
Genome IDLWDU01040758
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1928
End posion on genome 2013
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgtcagtctt
tRNA gene sequence 
GGAGGGGTGGCAGAGCGGACGATTGCAACGGTCTTGAAAACCGTCGAGGTGCAAGCCTCC
GGGGGTTCGAATCCCCCTCCCTCCGCgt
Downstream region at tRNA end position 
tatctcagcg
Secondary structure (Cloverleaf model)
>WENV170766113	Ser	TGA
                   t      GCgt tatctcagcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    A       T T G C
      C G A        A     CGAGGTGCAAGCCTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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