The detailed information of tRNA gene sequence


Sequence ID>WENV170766115
Genome IDLWDU01040758
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 961
End posion on genome 870
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcgccgtcaa
tRNA gene sequence 
GGAGAGGTGACAGAGTCTGGTCGAATGTGCTTCCCTGCTAAGGAAGTGACTGCTCACGCG
GTCCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
cttaaatccg
Secondary structure (Cloverleaf model)
>WENV170766115	Ser	GCT
                   a      GCCA cttaaatccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     A
  T         G A C A       G T G G G     C
  G           | | |                 T T
  G         A T G T
    T C G A        G     TGACTGCTCACGCGGTCC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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