The detailed information of tRNA gene sequence


Sequence ID>WENV170766129
Genome IDLWDU01040807
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 4748
End posion on genome 4667
Amino Acid Ser
Anticodon AGA
Upstream region at tRNA start position 
gcacaagaca
tRNA gene sequence 
GACACCGTGGCCGAGTGGTTAAGGCGTGTGATTAGAAATCACATGGGGTTTCCCCGCGGG
AGTTCGAATCTCTCCGGTGTCGttt
Downstream region at tRNA end position 
ttgaaaattt
Secondary structure (Cloverleaf model)
>WENV170766129	Ser	AGA
                   a      Gttt ttgaaaattt
                     G - C
                     A - T
                     C - G
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     C T C T C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G A G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TGGGGTTTCCCCGC
                    T - A
                    G - C
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    A G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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