The detailed information of tRNA gene sequence


Sequence ID>WENV170766158
Genome IDLWDU01040807
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 922
End posion on genome 839
Amino Acid Leu
Anticodon AAG
Upstream region at tRNA start position 
gcagttttaT
tRNA gene sequence 
GGCTGAGTGGCCGAGCGGTCTAAGGCGCTAGTTTAAGGCACTAGTCTCTTCGGAGGCGCG
AGTTCGAATCTCGCCTCAGTCATtt
Downstream region at tRNA end position 
ttgtaccacg
Secondary structure (Cloverleaf model)
>WENV170766158	Leu	AAG
                   T      ATtt ttgtaccacg
                     G - C
                     G + T
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C          T A
                    T     C G C T C     A
      C G A        G      | | | | |     G
    G       G C C G       G C G A G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TCTCTTCGGAGGC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  T       C
                  T       G
                    A A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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