The detailed information of tRNA gene sequence


Sequence ID>WENV170766173
Genome IDLWDU01040822
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 42922
End posion on genome 42833
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gatcccggcc
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGCTGAATGCGCCACATTGCTAATGTGGTGTCCCTTCACGGGGA
CCCCGGGTTCGAATCCCGGCCTCTCCGCCA
Downstream region at tRNA end position 
ttccatgcac
Secondary structure (Cloverleaf model)
>WENV170766173	Ser	GCT
                   c      GCCA ttccatgcac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        G      | | | | |     G
    G       G A C G       C C G G G     C
    G         | | |                 T T
    C       A T G C
      T G A        G     TGTCCCTTCACGGGGACC
                    C - G
                    C - G
                    A - T
                    C - G
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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