The detailed information of tRNA gene sequence


Sequence ID>WENV170766174
Genome IDLWDU01040823
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 27983
End posion on genome 27907
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cccccaaaac
tRNA gene sequence 
GGCGGTGTAGCTCAGTTGGTTAGAGCGCAGGCTTCATAAGCCTGAAGTCACTGGTTCAAG
TCCAGTCACCGCTACCA
Downstream region at tRNA end position 
atcacctcgg
Secondary structure (Cloverleaf model)
>WENV170766174	Met	CAT
                   c      ACCA atcacctcgg
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AAGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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