The detailed information of tRNA gene sequence


Sequence ID>WENV170766179
Genome IDLWDU01040826
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 28575
End posion on genome 28499
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tggtcggcac
tRNA gene sequence 
GGGCCCTTAGCTCAGTTGGTTAGAGCTGCTGACTCATAATCGGTAGGTCGTTGGTTCGAG
TCCAACAGGGCCCACCA
Downstream region at tRNA end position 
ttgcccgtgg
Secondary structure (Cloverleaf model)
>WENV170766179	Met	CAT
                   c      ACCA ttgcccgtgg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     C A A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     AGGTC
                    G + T
                    C - G
                    T + G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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