The detailed information of tRNA gene sequence


Sequence ID>WENV170766181
Genome IDLWDU01040828
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 262956
End posion on genome 263033
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tccccgcaga
tRNA gene sequence 
AGGGCAGTAGCTCCAATTGGTTAGAGCGACTGATTCCAAATCAGTAGGATCGGGGTTCGA
GTCCCTGCTGCCCTGCCA
Downstream region at tRNA end position 
tcgcccctcg
Secondary structure (Cloverleaf model)
>WENV170766181	Trp	CCA
                   a      GCCA tcgcccctcg
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T G
                    T     G T C C C     A
    T A A C        A      | + | | |     G
  T         C T C G       C G G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGAT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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