The detailed information of tRNA gene sequence


Sequence ID>WENV170766192
Genome IDLWDU01040837
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 20315
End posion on genome 20412
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tccctcaggt
tRNA gene sequence 
GGGAGTGGATCGGTGCTGGTGTGCCGCCCGGTCTTCAAAGCCGGTAGGGCCTCGTGAACA
GCGGGGCCGGTGGGTTCGATTCCCATGCACTCCCGCCA
Downstream region at tRNA end position 
cacccttcac
Secondary structure (Cloverleaf model)
>WENV170766192	SeC	TCA
                   t      GCCA cacccttcac
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      T C G        T      + | | | |     G
    G       T G G C       G T G G G     C
    G       + | | |                 T T
    T       G C C G
      G T          C     TAGGGCCTCGTGAACAGCGGGGCCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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