The detailed information of tRNA gene sequence


Sequence ID>WENV170766204
Genome IDLWDU01040860
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 24777
End posion on genome 24866
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cacgaacaca
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGCTGAATGGACTGGTTTCGAAAACCAGCGTGTCCTTCGGGGCA
CCGGGGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tccttgcggg
Secondary structure (Cloverleaf model)
>WENV170766204	Ser	CGA
                   a      GCCA tccttgcggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     A
    G       G A C C       G G G G G     C
    G         | | |                 T T
    C       A T G G
      T G A        A     CGTGTCCTTCGGGGCACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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