The detailed information of tRNA gene sequence


Sequence ID>WENV170766205
Genome IDLWDU01040860
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 24901
End posion on genome 24990
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgaacaagtc
tRNA gene sequence 
GGAGAGGTGTCAGAGCGGCTGAATGAGCACGCTTGGAAAGCGTGTGTGTCGGCAACGGCA
CCGGGGGTTCGAATCCCCCCCTCTCCGCCA
Downstream region at tRNA end position 
ttctcactgc
Secondary structure (Cloverleaf model)
>WENV170766205	Ser	GGA
                   c      GCCA ttctcactgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A C T       G G G G G     C
    G         | | |                 T T
    C       A T G A
      T G A        G     TGTGTCGGCAACGGCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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