The detailed information of tRNA gene sequence


Sequence ID>WENV170766216
Genome IDLWDU01040999
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 45397
End posion on genome 45488
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtttaaaact
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCCGAAGGCGCTCCCCTGCTAAGGGAGTATGGGCTTTATATCC
CATCGAGGGTTCGAATCCCTCCCTCTTCGCCA
Downstream region at tRNA end position 
ttttaagtag
Secondary structure (Cloverleaf model)
>WENV170766216	Ser	GCT
                   t      GCCA ttttaagtag
                     G - C
                     G + T
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TATGGGCTTTATATCCCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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