The detailed information of tRNA gene sequence


Sequence ID>WENV170766220
Genome IDLWDU01041000
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 912
End posion on genome 823
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccagtcttac
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGCCGAAAGCGGCGGTCTTGAAAACCGTTGAGGGTTTATCCCCT
CCCAGGGTTCGAATCCCTGCCTCTCCGCCA
Downstream region at tRNA end position 
ttattggcag
Secondary structure (Cloverleaf model)
>WENV170766220	Ser	TGA
                   c      GCCA ttattggcag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       C A G G G     C
    G         | | |                 T T
    C       A A G C
      C G A        G     TGAGGGTTTATCCCCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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