The detailed information of tRNA gene sequence


Sequence ID>WENV170766231
Genome IDLWDU01041015
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1903
End posion on genome 1816
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcaaaaatcc
tRNA gene sequence 
GGAGAGCTGGCCGAGCGGCCGAAGGCGCACGCCTGGAAAGTGTGTATACGGCAACGTATC
AAGGGTTCGAATCCCTTGCTCTCCGCCA
Downstream region at tRNA end position 
tttattgatg
Secondary structure (Cloverleaf model)
>WENV170766231	Ser	GGA
                   c      GCCA tttattgatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     T T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       A A G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TATACGGCAACGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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