The detailed information of tRNA gene sequence


Sequence ID>WENV170766311
Genome IDLWDU01041304
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 121995
End posion on genome 122079
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tctctattgg
tRNA gene sequence 
GGAGGGATGGCCGAGTGGCTAAAGGCGGCGCCCTGCTAAGGCGTTGGACTTCGCGTCCAC
GTGGGTTCGAATCCCACTCCCTCCGttt
Downstream region at tRNA end position 
cggtttgtat
Secondary structure (Cloverleaf model)
>WENV170766311	Ser	GCT
                   g      Gttt cggtttgtat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T A A        G     TGGACTTCGCGTCCAC
                    G + T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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