The detailed information of tRNA gene sequence


Sequence ID>WENV170766314
Genome IDLWDU01041304
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 122358
End posion on genome 122439
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtctacttga
tRNA gene sequence 
GGAGCGCTGGCAGAATGGTATTGCACTCGCCTCGAAAGCGAGCGCCCGAAAGGGCTTGGG
GGTTCGAATCCCTCGCGCTCCGttt
Downstream region at tRNA end position 
atgggattcc
Secondary structure (Cloverleaf model)
>WENV170766314	Ser	CGA
                   a      Gttt atgggattcc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     C - G          T A
                    T     C T C C C     A
        A A        G      | + | | |     G
      T     G A C G       G G G G G     C
      G     + | | |                 T T
      G     T T G C
        T A        A     CGCCCGAAAGGGCTT
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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