The detailed information of tRNA gene sequence


Sequence ID>WENV170766326
Genome IDLWDU01041321
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 19018
End posion on genome 18922
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ggagagcaga
tRNA gene sequence 
GGGGGCGGAGGGGGACTGGTGTCTCCGGCGGTCTTCAAAACCGTGCGGCCCGGCTAGAAC
CCGGGTAGGTGGGTTCGATTCCCACACGTCCCCGCCA
Downstream region at tRNA end position 
cggcttcggc
Secondary structure (Cloverleaf model)
>WENV170766326	SeC(p)	TCA
                   a      GCCA cggcttcggc
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     G   A          T T
                    A     C A C C C     A
      T C A        G      | | | | |     G
    G       G G G G       G T G G G     C
    G       | + | |                 T T
    T       C T C C
      G T          G     GCGGCCCGGCTAGAACCCGGGTAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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