The detailed information of tRNA gene sequence


Sequence ID>WENV170766351
Genome IDLWDU01041406
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 5988
End posion on genome 6077
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gccgggcccc
tRNA gene sequence 
GGAGGGATGCGAGAGCGGACGATTCGGCACGCCTGGAACGCGTGTGTGGCTTCACCGTCA
CCGTGGGTTCGAATCCCACTCCCTCCGCCG
Downstream region at tRNA end position 
ttcccggtgg
Secondary structure (Cloverleaf model)
>WENV170766351	Ser	GGA
                   c      GCCG ttcccggtgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A G C       G T G G G     C
    G       + | | |                 T T
    A       T T C G
      C G A        G     TGTGGCTTCACCGTCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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