The detailed information of tRNA gene sequence


Sequence ID>WENV170766369
Genome IDLWDU01041485
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1858
End posion on genome 1765
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
ccctgcccga
tRNA gene sequence
GGAGAGGTGGCCGAGCCAGGTTGAAGGCGCTCCCCTGCTAAGGGAGTATGGGCCCAAAAG
CTCATCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position
gtctccatcc
Secondary structure (Cloverleaf model)
>WENV170766369	Ser	GCT
                   a      GCCA gtctccatcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C C G A        G      | | | | |     G
  A         G C C G       G T G G G     C
  G           | | |                 T T
  G         A G G C
    T T G A        G     TATGGGCCCAAAAGCTCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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