The detailed information of tRNA gene sequence


Sequence ID>WENV170766383
Genome IDLWDU01041570
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 3286
End posion on genome 3362
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccggtgacat
tRNA gene sequence 
AGGGGCGTAGCTCAGCTGGCTAGAGCGTCGGTCTCCAAAACCGAAGGCCGGGGGTTCGAG
TCCCTCCGCCCCTGCCA
Downstream region at tRNA end position 
cacgtttgac
Secondary structure (Cloverleaf model)
>WENV170766383	Trp	CCA
                   t      GCCA cacgtttgac
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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