The detailed information of tRNA gene sequence


Sequence ID>WENV170766395
Genome IDLWDU01041623
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1420
End posion on genome 1328
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taactaccgt
tRNA gene sequence 
GGAGGGGTCGCATAGAGGCCTAGTGCGCCGGTTTGCTAAACCGGTAAGGGGTGTCAAGCC
CCTTCGAGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
cgtatttcac
Secondary structure (Cloverleaf model)
>WENV170766395	Ser	GCT
                   t      GCCA cgtatttcac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      A G A        C      | | | | |     G
    G       T A C G       G A G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TAAGGGGTGTCAAGCCCCTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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