The detailed information of tRNA gene sequence


Sequence ID>WENV170766408
Genome IDLWDU01041650
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 982
End posion on genome 906
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgaattgatt
tRNA gene sequence 
GGCGATGTAGCTCAGCCGGTTAGAGCGCGCGCTTCATAAGCGTGAGGTCGTAGGTTCAAG
TCCCACCATCGCTACCA
Downstream region at tRNA end position 
atcaattcaa
Secondary structure (Cloverleaf model)
>WENV170766408	Met	CAT
                   t      ACCA atcaattcaa
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     C A C C C     A
      C G A        A      | |   | |     A
    C       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G + T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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