The detailed information of tRNA gene sequence


Sequence ID>WENV170766423
Genome IDLWDU01041659
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 57201
End posion on genome 57293
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
catcttccgc
tRNA gene sequence 
GGAGGGTTCGCATAGTGGCCTAGTGCGCCCGCCTGCTAAGCGGGTTGGGGGTGTTGAGCC
TCCTCGCGGGTTCGAATCCCGCACCCTCCGCCA
Downstream region at tRNA end position 
cttttttcgt
Secondary structure (Cloverleaf model)
>WENV170766423	Ser	GCT
                   c      GCCA cttttttcgt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C G C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G C G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TTGGGGGTGTTGAGCCTCCTC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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