The detailed information of tRNA gene sequence


Sequence ID>WENV170766425
Genome IDLWDU01041661
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 59963
End posion on genome 60052
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acgctgccgt
tRNA gene sequence 
GGAGAGGTGCCAGAGCGGTTTAATGGGCACGCCTGGAAAGCGTGTGTGGGTGCAAGCTCA
CCGCAGGTTCGAATCCTGTCCTCTCCGCCA
Downstream region at tRNA end position 
tttttgtttt
Secondary structure (Cloverleaf model)
>WENV170766425	Ser	GGA
                   t      GCCA tttttgtttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     G
    G       G A C C       G C A G G     C
    G         | | |                 T T
    T       A T G G
      T T A        G     TGTGGGTGCAAGCTCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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