The detailed information of tRNA gene sequence


Sequence ID>WENV170766539
Genome IDLWDU01042014
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 124545
End posion on genome 124469
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaaaaccca
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCAGGGGACTCATAATCCCTTTGTCCGCGGTTCAAG
TCCGTGCAGGCCCACCA
Downstream region at tRNA end position 
tataaatcaa
Secondary structure (Cloverleaf model)
>WENV170766539	Met	CAT
                   a      ACCA tataaatcaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     G T G C C     A
      T G A        A      | + | | |     A
    T       C T C G       C G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TTGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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