The detailed information of tRNA gene sequence


Sequence ID>WENV170766574
Genome IDLWDU01042155
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 56396
End posion on genome 56486
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aggcggcaac
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCACGCTTGGAAAGCGTGTATACGTTTATCGCGT
ATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tctagtctcg
Secondary structure (Cloverleaf model)
>WENV170766574	Ser	GGA
                   c      GCCA tctagtctcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGTTTATCGCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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