The detailed information of tRNA gene sequence


Sequence ID>WENV170766596
Genome IDLWDU01042194
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1132
End posion on genome 1041
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaagtatttt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATATGGTTTATCCCG
TATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttcaatgctc
Secondary structure (Cloverleaf model)
>WENV170766596	Ser	GCT
                   t      GCCA ttcaatgctc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATATGGTTTATCCCGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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