The detailed information of tRNA gene sequence


Sequence ID>WENV170766616
Genome IDLWDU01042299
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 35848
End posion on genome 35773
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aagctacaaa
tRNA gene sequence 
AGGCCAGTAGCTCAACTGGTAGAGCGGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
gagtaaggaa
Secondary structure (Cloverleaf model)
>WENV170766616	Trp	CCA
                   a      GCCA gagtaaggaa
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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