The detailed information of tRNA gene sequence


Sequence ID>WENV170766624
Genome IDLWDU01042315
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 19676
End posion on genome 19766
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tacagatata
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGGCGGTTTCGAAAGCCGTTGACGGGTAAACCCCG
TCCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ctaatttagg
Secondary structure (Cloverleaf model)
>WENV170766624	Ser	CGA
                   a      GCCA ctaatttagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G T C G       G G G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGACGGGTAAACCCCGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T + G
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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