The detailed information of tRNA gene sequence


Sequence ID>WENV170766648
Genome IDLWDU01042366
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 13486
End posion on genome 13396
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taaaaatata
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTCGAATGCGGCGGTCTTGAAAACCGTTGATGGTTAATAGCTA
TCCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gaacctagta
Secondary structure (Cloverleaf model)
>WENV170766648	Ser	TGA
                   a      GCCA gaacctagta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGATGGTTAATAGCTATCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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