The detailed information of tRNA gene sequence


Sequence ID>WENV170766665
Genome IDLWDU01042380
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 23218
End posion on genome 23142
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaagaatatt
tRNA gene sequence 
GGTGATGTAGCTCAGACGGTTAGAGCGTCGCACTCATAACGCGAAGGTCGGTGGTTCAAG
TCCACCCATCACCACCA
Downstream region at tRNA end position 
gactttattt
Secondary structure (Cloverleaf model)
>WENV170766665	Met	CAT
                   t      ACCA gactttattt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     C C A C C     A
      A G A        A      | | | | |     A
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    A   C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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