The detailed information of tRNA gene sequence


Sequence ID>WENV170766667
Genome IDLWDU01042382
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 21087
End posion on genome 21177
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
catatcttca
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGATTGCGCAGGCTTGGAAAGCTTGTAAAGGTTAATAGCCT
TTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ctatgctctg
Secondary structure (Cloverleaf model)
>WENV170766667	Ser	GGA
                   a      GCCA ctatgctctg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TAAAGGTTAATAGCCTTTC
                    C - G
                    A - T
                    G + T
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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