The detailed information of tRNA gene sequence


Sequence ID>WENV170766674
Genome IDLWDU01042386
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 2579
End posion on genome 2503
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taaaaacaag
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCAGTGGACTCATAATCCATTGGTCGGAGGTTCGAG
TCCTCCCGGGCCCACCA
Downstream region at tRNA end position 
tagaatgtta
Secondary structure (Cloverleaf model)
>WENV170766674	Met	CAT
                   g      ACCA tagaatgtta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C C T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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