The detailed information of tRNA gene sequence


Sequence ID>WENV170766677
Genome IDLWDU01042402
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 13989
End posion on genome 13912
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tattaagtac
tRNA gene sequence 
GGAGTGGTAGTTCAGTTTGGTTAGAATGCCTGCCTGTCACGCAGGAGGTCGCGGGTTCGA
GTCCCGTCCACTCCGCCA
Downstream region at tRNA end position 
aacttttaaa
Secondary structure (Cloverleaf model)
>WENV170766677	Asp	GTC
                   c      GCCA aacttttaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
    T T G A        A      + | | | |     G
  T         C T T G       G C G G G     C
  G         | | | +                 T T
  G         G A A T
    T T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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