The detailed information of tRNA gene sequence


Sequence ID>WENV170766679
Genome IDLWDU01042424
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 32125
End posion on genome 32201
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gtgctttttt
tRNA gene sequence 
CGGAGTGTAGCGCAGTTTGGTAGCGTATCTGGTTTGGGACCAGAGGGTCGGGGGTTCAAG
TCCCTCCACTCCGACCA
Downstream region at tRNA end position 
atattttgta
Secondary structure (Cloverleaf model)
>WENV170766679	Pro	TGG
                   t      ACCA atattttgta
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       C G C G       G G G G G     C
    T       | | | +                 T T
    G       G C G T
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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