The detailed information of tRNA gene sequence


Sequence ID>WENV170766687
Genome IDLWDU01042429
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 28405
End posion on genome 28329
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccctctttag
tRNA gene sequence 
TGCGGGGTGGAGCAGCATGGTAGCTCGTCGGGCTCATAACCCGAAGGTCATAGGTTCAAA
TCCTATCCCCGCTACCA
Downstream region at tRNA end position 
aatttcctta
Secondary structure (Cloverleaf model)
>WENV170766687	Met	CAT
                   g      ACCA aatttcctta
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A T C C     A
      C G A        G      | | | | |     A
    A       C G A G       A T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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