The detailed information of tRNA gene sequence


Sequence ID>WENV170766717
Genome IDLWDU01042499
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 48840
End posion on genome 48768
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ctgctagtga
tRNA gene sequence 
GGGGATGTAGCTCAAACGGGAGAGCGCTGCCTTTGCAAGGCAGAGGTTAGGGGTTCGATC
CCCCTCATCTCCAttc
Downstream region at tRNA end position 
gtgatcgatc
Secondary structure (Cloverleaf model)
>WENV170766717	Ala	TGC
                   a      Attc gtgatcgatc
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          C T
                    T     T C C C C     A
      A A A        A      | | | | |     G
    C       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTT
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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