The detailed information of tRNA gene sequence


Sequence ID>WENV170766720
Genome IDLWDU01042501
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 43900
End posion on genome 43989
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tagtgagcgc
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTCGATCGGGCCGGTTTCGAAAACCGGTGTGCCTTTGCGGGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gatcgatccg
Secondary structure (Cloverleaf model)
>WENV170766720	Ser	CGA
                   c      GCCA gatcgatccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G       +   | |                 T T
    T       T C G G
      C G A        G     TGTGCCTTTGCGGGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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