The detailed information of tRNA gene sequence


Sequence ID>WENV170766723
Genome IDLWDU01042505
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 17882
End posion on genome 17807
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agtgaactat
tRNA gene sequence 
CGCGGGGTGGAGCAGTTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCGAGT
CCTGCCCCCGCTACCA
Downstream region at tRNA end position 
aaaattgagt
Secondary structure (Cloverleaf model)
>WENV170766723	Met	CAT
                   t      ACCA aaaattgagt
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G T C C     A
      T G A        G      | | | | |     G
    T       C G A G       G C A G G     C
    G       | | | |                 T T
    G       G C T C
      C A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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