The detailed information of tRNA gene sequence


Sequence ID>WENV170766730
Genome IDLWDU01042532
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 6905
End posion on genome 6830
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cggtgcccat
tRNA gene sequence 
GCCGGTGTAGCTCAGTTGGTAGAGCAAAGGAATCATAATCCTTGGGTCCGGGGTTCGAGT
CCCTGCGCCGGTACCA
Downstream region at tRNA end position 
atttgcgatt
Secondary structure (Cloverleaf model)
>WENV170766730	Met	CAT
                   t      ACCA atttgcgatt
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    A - T
                    A - T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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