The detailed information of tRNA gene sequence


Sequence ID>WENV170766774
Genome IDLWDU01042685
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 8163
End posion on genome 8088
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgatgatttt
tRNA gene sequence 
AGGCAAGTGGCTCAATTGGTAGAGTGGCGGTCTCCAAAACCGTTGGTTGGGGGTTCGAGT
CCCTCCTTGCCTGCCA
Downstream region at tRNA end position 
aatttaaagg
Secondary structure (Cloverleaf model)
>WENV170766774	Trp	CCA
                   t      GCCA aatttaaagg
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          G     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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