The detailed information of tRNA gene sequence


Sequence ID>WENV170766791
Genome IDLWDU01042810
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 148
End posion on genome 223
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aagagtattt
tRNA gene sequence 
AGGCAAGTGGCTCAATTGGTAGAGTGGCGGTCTCCAAAACCGTTGGTTGGGGGTTCGAGT
CCCTCCTTGCCTGCCA
Downstream region at tRNA end position 
tatgaaaggt
Secondary structure (Cloverleaf model)
>WENV170766791	Trp	CCA
                   t      GCCA tatgaaaggt
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          G     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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