The detailed information of tRNA gene sequence


Sequence ID>WENV170766808
Genome IDLWDU01042922
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 5870
End posion on genome 5794
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcctctttag
tRNA gene sequence 
TGCGGGGTGGAGCAGTATGGTAGCTCGTCGGGCTCATAACCCGAAGGTCATAGGTTCAAA
TCCTGTCCCCGCTACCA
Downstream region at tRNA end position 
atttagaccc
Secondary structure (Cloverleaf model)
>WENV170766808	Met	CAT
                   g      ACCA atttagaccc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      | + | | |     A
    A       C G A G       A T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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