The detailed information of tRNA gene sequence


Sequence ID>WENV170766812
Genome IDLWDU01042950
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 299
End posion on genome 210
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccaatcttcc
tRNA gene sequence 
GGAGGGATGGCAGAGCGGCTGAATGCACTGGTCTTGAAAACCAGCAAGGGCTTATACCCT
TCCAGGGTTCAAATCCCTGTCCCTCCACCA
Downstream region at tRNA end position 
ctcaaatcat
Secondary structure (Cloverleaf model)
>WENV170766812	Ser	TGA
                   c      ACCA ctcaaatcat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G T C C C     A
      C G A        G      | | | | |     A
    G       G A C G       C A G G G     C
    G         | | |                 T T
    C       A T G C
      T G A        A     CAAGGGCTTATACCCTTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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