The detailed information of tRNA gene sequence


Sequence ID>WENV170766813
Genome IDLWDU01042951
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 2029
End posion on genome 1953
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccctcttttt
tRNA gene sequence 
GGTTATGTAGCTCAGCTGGTTAGAGCACAGCATTCATAATGCTGGGGTCGGTGGTTCAAG
TCCACCCATAACCACCA
Downstream region at tRNA end position 
tatcccataa
Secondary structure (Cloverleaf model)
>WENV170766813	Met	CAT
                   t      ACCA tatcccataa
                     G - C
                     G - C
                     T - A
                     T - A
                     A - T
                     T - A
                     G - C          T G
                    T     C C A C C     A
      C G A        A      | | | | |     A
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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