The detailed information of tRNA gene sequence


Sequence ID>WENV170766814
Genome IDLWDU01042973
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 3704
End posion on genome 3628
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
caccaaattt
tRNA gene sequence 
GGAGTGGTAGTTCAGTTGGTTAGAACGCCTGCCTGTCACGCAGGAGGTCGCGGGTTCGAC
CCCCGTCCACTCCGCCA
Downstream region at tRNA end position 
ttacaaagaa
Secondary structure (Cloverleaf model)
>WENV170766814	Asp	GTC
                   t      GCCA ttacaaagaa
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          C C
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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